A first inventory of the labile biochemicals found in Avignon groundwater: can we identify potential bacterial substrates?

Ludivine Rousset; Marina Gillon; Catherine Duport; Thierry Clavel; Marie Lagrée; Mounir Traikia; Christos Panagiotopoulos; Odile Berge

doi:10.1051/e3sconf/20198802001

All issues

Volume 88 (2019)

E3S Web Conf., 88 (2019) 02001

References

Open Access

Issue		E3S Web Conf. Volume 88, 2019 i-DUST 2018 – Inter-Disciplinary Underground Science & Technology


Article Number		02001
Number of page(s)		7
Section		Biology
DOI		https://doi.org/10.1051/e3sconf/20198802001
Published online		22 February 2019

B. Guzman-Herrador A. Carlander S. Ethelberg, B.F. De Blasio, M. Kuusi, V. Lund, M. Löfdahl, E. Macdonald, G. Nichols, C. Schönning, B. Sudre, L. Trönnberg, L. Vold, J.C. Semenza, K. Nygard, Euro Surveill. 20, 24 (2015) [Google Scholar]
M. Blanchet O. Pringault C. Panagiotopoulos, D. Lefèvre, B. Charrière, J.F. Ghiglione, C. Fernandez, F.L. Aparicio, C. Marrasé, P. Catala, L. Oriol, J. Caparros, F. Joux, Aquat. Sci. 79, (2016) [Google Scholar]
Y. Shen F.H. Chapelle, E.W. Strom, R. Benner, Biogeochemistry. 122, 61 (2015) [CrossRef] [Google Scholar]
S. Nofal, PhD thesis, Université d’Avignon et des Pays de Vaucluse, (2014) [Google Scholar]
S. Nofal B. Blavoux, A.L. Cognard-Plancq, V. Marc, Y. Travi, Géologues. 167, 61 (2010) [Google Scholar]
C.E. Morris D.C. Sands, B.A. Vinatzer, C. Glaux, C. Guilbaud, A. Buffière, S. Yan, H. Dominguez, B.M. Thompson, ISME J. 2, 321 (2008) [CrossRef] [PubMed] [Google Scholar]
C. Panagiotopoulos, R. Sempéré J. Para P. Raimbault, C. Rabouille, B. Charrière, Biogeosciences. 9, 1827 (2012) [CrossRef] [Google Scholar]
J. Causse O. Thomas, A.V. Jung, M.F. Thomas, Water Res. 108, 312 (2017) [CrossRef] [PubMed] [Google Scholar]
D. S. Wishart T. Jewison, A.C Guo, M. Wilson, C. Knox, Y. Liu, Y. Djoumbou, R. Mandal, F. Aziat, E. Dong, S. Bouatra, I. Sinelnikov, D. Arndt, J. Xia, P. Liu, F. Yallou, T. Bjorndahl, R. Perez-Pineiro, R. Eisner, F. Allen, V. Neveu, R. Greiner, A. Scalbert, Nucleic Acids Res. 41, 801, (2013) [Google Scholar]
A. Rusch S. Suchail, M. Valantin-Morison, J.P. Sarthou, J. Roger-Estrade, BioControl, 58, 17, (2013) [CrossRef] [Google Scholar]
R. Hofman C. Griebler, Aquat. Microb. Ecol. 81, 55 (2018) [CrossRef] [Google Scholar]
J. Brillard, C.M.S. Dupont, O. Berge, C. Dargaignaratz, S. Oriol-Gagnier, C. Doussan, V. Broussolle, M. Gillon, T. Clavel, A. Berard, BioMed Res. Int. 2015, 1, (2015) [CrossRef] [Google Scholar]
D.J. Repeta T.M. Quan, L.I. Aluwihare, A.M. Accardi, Geochim Cosmochim Acta, 66, 955, (2002) [CrossRef] [Google Scholar]
C. Panagiotopoulos D.J. Repeta, C.G. Johnson, Org. Geochem., 38, 884, (2007) [CrossRef] [Google Scholar]
C. Panagiotopoulos, R. Sempéré I. Obernosterer L. Striby, M. Goutx, F. VanVambeke, S. Gautier, R. Lafont, Org. Geochem., 33, 985, (2002) [CrossRef] [Google Scholar]

[1] B. Guzman-Herrador A. Carlander S. Ethelberg, B.F. De Blasio, M. Kuusi, V. Lund, M. Löfdahl, E. Macdonald, G. Nichols, C. Schönning, B. Sudre, L. Trönnberg, L. Vold, J.C. Semenza, K. Nygard, Euro Surveill. 20, 24 (2015) [Google Scholar]

[2] M. Blanchet O. Pringault C. Panagiotopoulos, D. Lefèvre, B. Charrière, J.F. Ghiglione, C. Fernandez, F.L. Aparicio, C. Marrasé, P. Catala, L. Oriol, J. Caparros, F. Joux, Aquat. Sci. 79, (2016) [Google Scholar]

[3] Y. Shen F.H. Chapelle, E.W. Strom, R. Benner, Biogeochemistry. 122, 61 (2015) [CrossRef] [Google Scholar]

[4] S. Nofal, PhD thesis, Université d’Avignon et des Pays de Vaucluse, (2014) [Google Scholar]

[5] S. Nofal B. Blavoux, A.L. Cognard-Plancq, V. Marc, Y. Travi, Géologues. 167, 61 (2010) [Google Scholar]

[6] C.E. Morris D.C. Sands, B.A. Vinatzer, C. Glaux, C. Guilbaud, A. Buffière, S. Yan, H. Dominguez, B.M. Thompson, ISME J. 2, 321 (2008) [CrossRef] [PubMed] [Google Scholar]

[7] C. Panagiotopoulos, R. Sempéré J. Para P. Raimbault, C. Rabouille, B. Charrière, Biogeosciences. 9, 1827 (2012) [CrossRef] [Google Scholar]

[8] J. Causse O. Thomas, A.V. Jung, M.F. Thomas, Water Res. 108, 312 (2017) [CrossRef] [PubMed] [Google Scholar]

[9] D. S. Wishart T. Jewison, A.C Guo, M. Wilson, C. Knox, Y. Liu, Y. Djoumbou, R. Mandal, F. Aziat, E. Dong, S. Bouatra, I. Sinelnikov, D. Arndt, J. Xia, P. Liu, F. Yallou, T. Bjorndahl, R. Perez-Pineiro, R. Eisner, F. Allen, V. Neveu, R. Greiner, A. Scalbert, Nucleic Acids Res. 41, 801, (2013) [Google Scholar]

[10] A. Rusch S. Suchail, M. Valantin-Morison, J.P. Sarthou, J. Roger-Estrade, BioControl, 58, 17, (2013) [CrossRef] [Google Scholar]

[11] R. Hofman C. Griebler, Aquat. Microb. Ecol. 81, 55 (2018) [CrossRef] [Google Scholar]

[12] J. Brillard, C.M.S. Dupont, O. Berge, C. Dargaignaratz, S. Oriol-Gagnier, C. Doussan, V. Broussolle, M. Gillon, T. Clavel, A. Berard, BioMed Res. Int. 2015, 1, (2015) [CrossRef] [Google Scholar]

[13] D.J. Repeta T.M. Quan, L.I. Aluwihare, A.M. Accardi, Geochim Cosmochim Acta, 66, 955, (2002) [CrossRef] [Google Scholar]

[14] C. Panagiotopoulos D.J. Repeta, C.G. Johnson, Org. Geochem., 38, 884, (2007) [CrossRef] [Google Scholar]

[15] C. Panagiotopoulos, R. Sempéré I. Obernosterer L. Striby, M. Goutx, F. VanVambeke, S. Gautier, R. Lafont, Org. Geochem., 33, 985, (2002) [CrossRef] [Google Scholar]